These small eddies or vortices are extremely common downwind of all the islands off the coast of Southern California and Baja during the spring and summer. Often times they will form long chains of alternating clockwise and counter-clockwise eddies called vortex streets (Von Karmen Vortices). On the best days, you can see as many as a dozen eddies lined up in a row. It's most common off Baja downwind of Guadalupe Island. In the case of the photo above, winds were pretty weak so instead of getting a chain of vortices, there was only one. Also, the direction of the wind may not have been ideal for multiple vortices as well.
On a side note... it seems that the visual appearance of the eddies depends on the thickness of the marine layer and the rate of vortex shedding. For example, the eddies may look more like a spiral galaxy when the general low level wind is stronger and the stratus deck is thinner. Conversely, the eddies may look more like the eye of a hurricane with the general low level wind is weaker and the stratus deck is thicker.